Max-Planck-Institut für Informatik
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DomainGraph Documentation


How to obtain the appropriate file for Differential Expression Analysis...

... using AltAnalyze

AltAnalyze generates a file named *-DomainGraph.txt, which is specifically designed for further analysis using DomainGraph. This file can be used to analyze a particular network of interest. It can also be used for the general analysis of differential expression within the data.

How to obtain the appropriate files for Single Experiments...

... using the Affymetrix Power Tools (APT)

... using Affymetrix' Expression Console